One circle per frequency
The term cne2πins is a point going round a circle of radius |cn|, n times per turn of the pen, starting at the angle of cn. A negative n turns the other way. The spectrum lists those radii; the picture is what they add up to.
Why the overshoot stays
A partial sum of a Fourier series is the function smoothed by the Dirichlet kernel, which has negative lobes. More terms make the lobes narrower but no shallower, so next to a jump the overshoot moves closer and stays at about 0.179 for a jump of 2.
Where the sand goes
A grain on a vibrating plate is thrown about until it lands somewhere that does not move. The nodal lines are where u=0, and near them the distance to the line is about |u|/|∇u|; the plate uses a version of that measure which is exact for a single wave and largest at the antinodes, so the sand clears from there first.
Notes with more than one mode
The square's modes φmn and φnm always share a note, by symmetry. A number such as 65=12+82=42+72 gives an accidental coincidence on top of that: four modes, one note, and a family of figures that no single pair of them can make.
No crystal is five-fold
A pattern that repeats in two directions can be turned onto itself only by a half, a third, a quarter or a sixth of a turn: the crystallographic restriction. The sum of five waves has ten-fold symmetry because it never repeats. Dan Shechtman found the same ten-fold order in the diffraction pattern of a real alloy in 1982.
Order without a period
What makes the third plate a quasicrystal and not noise is its spectrum: a handful of sharp points on a circle. A random pattern would spread its spectrum over a whole disc; a crystal's points would sit on a lattice.
Beats you can see
Two notes a few hertz apart swell and fade at the difference of their frequencies. Two gratings a few per cent apart do the same across space, and the eye, which cannot resolve the slits, sees only the slow difference. The moiré is a beat drawn in light.
A lens is a Fourier transform
Far from an opening, or in the focal plane of a lens, light from every point of the opening arrives at each point of the screen with a phase that depends on direction. Adding those contributions is exactly the Fourier integral, so the pattern on the screen is the transform of the opening (Fraunhofer).
Why the colours separate
The pattern for light of wavelength λ is the transform evaluated at q=s/λ, where s is the position on the screen. Red light makes the same pattern as blue, only larger, so wherever the pattern is not flat the colours come apart. At the centre every colour is at its brightest and the light stays white.